The complete chloroplast genome of Sinomenium acutum (Menispermaceae)

  • Kim, Jinhyuk; 
  • Lee, Junki; 
  • Um, Sanghee; 
  • Choi, Sunseong; 
  • Kim, Hyojin; 
  • ... Chun, Hyang Sook; 
  • 외 1명
Citations

SCOPUS

2

초록

We generated the complete chloroplast genome sequence of Sinomenium acutum, a species of the Menispermaceae family, and characterized from the de novo assembly of Illumina HiSeq paired-end sequencing data. The total length of the chloroplast genome of S. acutum was 162,787 bp with a large single-copy (LSC) region of 91,430 bp, a small single-copy (SSC) region of 21,245 bp, and a pair of identical inverted repeat regions (IRs) of 25,056 bp. The total of 131 genes were annotated in the chloroplast genome of Sinomenium acutum, including 85 protein-coding genes, 38 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. The phylogenetic analysis of S. acutum with 18 related species revealed the closest taxonomical relationship with Menispermum dauricum in the Menispermaceae family. © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

키워드

complete chloroplast genome; next generation sequencing; phylogenetic tree; Sinomenium acutum
제목
The complete chloroplast genome of Sinomenium acutum (Menispermaceae)
저자
Kim, Jinhyuk; Lee, Junki; Um, Sanghee; Choi, Sunseong; Kim, Hyojin; Chun, Hyang Sook; Nah, Gyoungju
DOI
10.1080/23802359.2020.1797570
발행일
2020-07
유형
Article
저널명
Mitochondrial DNA Part B: Resources
권
5
호
3
페이지
3010 ~ 3011