Genomic profiling of Antarctic geothermal microbiomes using long-read, Hi-C, and single-cell techniques

  • Myeong, Nu Ri; 
  • Choe, Yong-Hoe; 
  • Shin, Seung Chul; 
  • Kim, Jinhyun; 
  • Sul, Woo Jun; 
  • 외 1명
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초록

Geothermal features in Antarctica provide favorable conditions for diverse microorganisms, yet their genomic diversity remains poorly understood. Here, we present an integrated dataset comprising PacBio HiFi and Hi-C metagenomic sequencing, along with single-cell amplified genomes (SAGs) from two high-altitude geothermal sites, Mount Melbourne and Mount Rittmann, in Antarctica. The long-read HiFi sequencing, coupled with Hi-C, enhances the understanding of microbiome diversity and functionality in this unique ecosystem by providing more complete and accurate genomic information. SAGs complement this by recovering rare microbial taxa and offering a strain-resolved perspective. This dataset aims to deepen our understanding of microbial evolution and ecology in Antarctic geothermal environments, and facilitate cross-comparison with other geothermal environments globally.

키워드

NORTHERN VICTORIA LAND; MOUNT EREBUS; SP-NOV; SOILS; RECOVERY; TOOL
제목
Genomic profiling of Antarctic geothermal microbiomes using long-read, Hi-C, and single-cell techniques
저자
Myeong, Nu Ri; Choe, Yong-Hoe; Shin, Seung Chul; Kim, Jinhyun; Sul, Woo Jun; Kim, Mincheol
DOI
10.1038/s41597-024-03875-z
발행일
2024-09
유형
Article
저널명
Scientific Data
권
11
호
1

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