Flavobacterium microcysteis sp. Nov., isolated from a culture of microcystis aeruginosa

  • Seo, Ye Lin; 
  • Jeong, Sang Eun; 
  • Jin, Hyun Mi; 
  • Jeon, Che Ok
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초록

A Gram-stain-negative, yellow-pigmented, strictly aerobic bacterium, designated strain MaA-Y11T, was isolated from a culture of Microcystis aeruginosa in the Republic of Korea. Cells were non-motile rods showing catalase-and oxidase-positive reactions. Growth of strain MaA-Y11T was observed at 25–37 °C (optimum, 30 °C) and pH 6.0–9.0 (optimum, 7.0) and in the presence of 0–1.0% (w/v) NaCl (optimum, 0%). Strain MaA-Y11T did not produce flexirubin-type pigments. Strain MaA-Y11T contained iso-C15:0, iso-C17:0 3-OH and summed feature 3 (C16:1 ω7c and/or C16:1 ω6c) as major cellular fatty acids and menaquinone-6 as the sole isoprenoid quinone. Phosphatidylethanolamine, three unidentified aminolipids and four unidentified lipids were detected as the major polar lipids. The G+C content of the genomic DNA was 37.0 mol%. Phylogenetic analysis, based on 16S rRNA gene sequences, showed that strain MaA-Y11T formed a phyletic lineage with Flavobacterium lindanitolerans IP-10T within the genus Flavobacterium. Strain MaA-Y11T was most closely related to Flavobacterium lindanitolerans IP-10T, with a 98.85% 16S rRNA gene sequence similarity, and shared less than 93.87% sequence similarities with other type strains. Average nucleotide identity and in silico DNA–DNA hybridization values between strain MaA-Y11T and the type strain of F. lindanitolerans were 87.0 and 32.3%, respectively. Here, we conclude that strain MaA-Y11T represents a new species of the genus Flavobacterium, for which the name Flavobacterium microcysteis sp. nov. is proposed. The type strain is MaA-Y11T (=KACC 21225T=JCM 33501T). © 2020 The Authors.

키워드

Bacteroidetes; Cyanobacterium; Flavobacterium microcysteis; Microcystis; New taxa; bacterial DNA; bacterial RNA; gamma interferon inducible protein 10; genomic DNA; nucleotide; RNA 16S; bacterial DNA; farnoquinone; fatty acid; phosphatidylethanolamine; RNA 16S; Article; bacterium culture; bacterium isolate; computer model; DNA base composition; DNA DNA hybridization; Flavobacterium; Flavobacterium microcysteis; Microcystis aeruginosa; new species; nonhuman; phase contrast microscopy; phylogenetic tree; priority journal; RNA sequence; transmission electron microscopy; type strain; bacterium identification; chemistry; classification; DNA sequence; Flavobacterium; genetics; isolation and purification; Microcystis; nucleic acid hybridization; phylogeny; pigmentation; South Korea; Bacterial Typing Techniques; Base Composition; DNA, Bacterial; Fatty Acids; Flavobacterium; Microcystis; Nucleic Acid Hybridization; Phosphatidylethanolamines; Phylogeny; Pigmentation; Republic of Korea; RNA, Ribosomal, 16S; Sequence Analysis, DNA; Vitamin K 2
제목
Flavobacterium microcysteis sp. Nov., isolated from a culture of microcystis aeruginosa
저자
Seo, Ye Lin; Jeong, Sang Eun; Jin, Hyun Mi; Jeon, Che Ok
DOI
10.1099/ijsem.0.003867
발행일
2020-02
유형
Article
저널명
International Journal of Systematic and Evolutionary Microbiology
권
70
호
2
페이지
1037 ~ 1041